sbatch should not include env in its submission to make state reproducible

JanLuca · JanLuca · commit f9805663c9aa · 2025-08-12T18:17:36.000+02:00
diff --git a/varipeps/utils/slurm.py b/varipeps/utils/slurm.py
@@ -109,7 +109,11 @@ def run_slurm_script(path, cwd=None):
         }
 
         p = subprocess.run(
-            ["sbatch", str(path)], capture_output=True, text=True, cwd=cwd, env=prog_env
+            ["sbatch", "--export=NONE", str(path)],
+            capture_output=True,
+            text=True,
+            cwd=cwd,
+            env=prog_env,
         )
 
         if p.returncode != 0:

Original file line number	Diff line number	Diff line change
`@@ -109,7 +109,11 @@ def run_slurm_script(path, cwd=None):`
`109`	`109`	`}`
`110`	`110`
`111`	`111`	`p = subprocess.run(`
`112`		`- ["sbatch", str(path)], capture_output=True, text=True, cwd=cwd, env=prog_env`
	`112`	`+ ["sbatch", "--export=NONE", str(path)],`
	`113`	`+ capture_output=True,`
	`114`	`+ text=True,`
	`115`	`+ cwd=cwd,`
	`116`	`+ env=prog_env,`
`113`	`117`	`)`
`114`	`118`
`115`	`119`	`if p.returncode != 0:`