Prepare for release.

Author: hadley

cran-comments.md

@@ -1,10 +1,6 @@
-This is a resubmission, using the canonical link to the proto package.
-
----
-
 ## Test environments
-* OS X, R 3.2.2
-* Ubuntu 14.04, R 3.2.2
+* OS X, R 3.2.3
+* Ubuntu 14.04, R 3.2.3
 * win-builder (devel and release)
 
 ## R CMD check results
@@ -19,9 +15,127 @@ There were no ERRORs or WARNINGs. I see one NOTE:
   I think the problem is a poorly configured webserver: 
   `curl http://fueleconomy.gov` works, but `curl -I http://fueleconomy.gov`
   (which sends a HEAD request) does not.
+
+## Reverse dependencies
+
+* I ran `R CMD check` on 674 all reverse dependencies
+  (summary at https://github.com/hadley/ggplot2/blob/master/revdep/)
+  
+* Maintainers with NOTEs, WARNINGs, or ERRORS were notified on Feb 10, 
+  and again on Feb 25. I have switched to a new automated system for 
+  maintainer notification, which ensures each maintainer gets a personalised
+  email, and hopefully is more likely to take action.
+  
+* I've also tried to give a more detailed breakdown of ERRORs/WARNINGs
+  (but not NOTEs below). Please let me know if there's anything else I 
+  can do to make this more helpful.
+  
+As far as I can tell, there are 3 failures related to changes to ggplot2:
+
+* ggtern: checking examples ... ERROR
+  Caused by change in API. Author is aware but hasn't fixed.
+
+* plotly: checking tests ... ERROR
+  Probably caused by changes to histogram API.
+
+* precrec: checking tests ... ERROR
+  Using a bad test for class inheritance + minor change in ggplot2.
+
+There were a number of failures that don't appear to be related to changes in ggplot2.
+
+* archivist: checking examples ... ERROR
+  Looks like ggplot2 2.0.0 problem.
+
+* BCEA: checking examples ... ERROR
+  I failed to install R2jags.
+
+* bcrm: checking examples ... ERROR
+  Another JAGS problem
+
+* biogram: checking examples ... ERROR
+  ggplot2 2.0.0 problem - using invalid parameter.
+
+* doBy: checking running R code from vignettes ... ERROR
+  Needs very latest version of nlme
+
+* dotwhisker: checking examples ... ERROR
+  Needs to attach grid (ggplot2 2.0.0 problem)
+
+* emil: checking examples ... ERROR
+  Needs very latest version of nlme
+
+* eyetrackingR: checking examples ... ERROR
+  Needs suggested package (lme4) to run examples
+
+* fuzzyforest: checking examples ... ERROR
+  Needs GO.db
+
+* geoknife: checking examples ... ERROR
+  Random curl failure
+
+* ggdendro: checking Rd cross-references ... WARNING
+  ggplot2 2.0.0 problem: links to help topic that no longer exists
+
+* ggthemes: checking tests ... ERROR
+  Automated code style checking failure
+
+* HistData: checking examples ... ERROR
+  Namespace problem
+
+* iNEXT: checking Rd cross-references ... WARNING
+  ggplot2 2.0.0 problem: links to help topic that no longer exists
+
+* metaheur: checking for missing documentation entries ... ERROR
+  Needs very latest version of nlme
+
+* mlr: checking examples ... ERROR
+  Needs very latest version of nlme
 
-  I've also updated my email address to hadley@rstudio.com
+* multitable: checking running R code from vignettes ... ERROR
+  Needs lme4
+  
+* preproviz: checking tests ... ERROR
+  Needs very latest version of nlme
+
+* ryouready: checking examples ... ERROR
+  Needs very latest version of nlme
+  
+* Rz: checking dependencies in R code ... WARNING
+  Namespace issues
+
+* SciencesPo: checking examples ... ERROR
+  Pre-existing ggplot2 2.0.0 problems
+
+* sdmvspecies: checking for executable files ... WARNING
+  Includes executable file
+
+* vcdExtra: checking examples ... ERROR
+  Needs very latest version of nlme
+
+* vdmR: checking examples ... ERROR
+  Not sure: internal grid error.
+
+Additionally, I:
+
+* Failed to install dependencies for: AFM, benchmarkme, clusterfly, demi, 
+  ibmdbR, lme4, metaMix, PKgraph, pmc, prcbench, rms, rstanarm, SeqFeatR, 
+  SpaDES, specmine, survMisc, toaster, vcfR
 
-## Downstream dependencies
+* Failed to install: abd, alm, arqas, ARTool, BACA, bamdit, bdscale, bdvis, 
+  benchmark, biomod2, bootnet, brainGraph, brms, BTSPAS, capm, caret, 
+  caretEnsemble, ChainLadder, classify, climwin, conformal, COPASutils, 
+  CosmoPhotoz, covmat, crmPack, Deducer, diveRsity, eeptools, erer, extracat, 
+  ez, FAOSTAT, fheatmap, geneSLOPE, gettingtothebottom, gitter, greport, 
+  hdnom, HistDAWass, HLMdiag, hyperSpec, IntegratedJM, interplot, ITEMAN, kobe, 
+  LANDD, learnstats, lmerTest, localgauss, LOGIT, ltbayes, marked, MergeGUI, 
+  merTools, Methplot, micromap, MissingDataGUI, mizer, morse, mosaic, MultiMeta, 
+  mwaved, ncappc, NeuralNetTools, NMF, nparACT, npregfast, OriGen, partialAR, 
+  PBImisc, pequod, Phxnlme, playwith, PlotPrjNetworks, pomp, PPtreeViz, 
+  predictmeans, PSAboot, qgraph, quadrupen, RcmdrPlugin.KMggplot2, 
+  RcmdrPlugin.MA, rddtools, refund, refund.shiny, RFmarkerDetector, 
+  robCompositions, RobustEM, robustlmm, RSA, RSDA, rstan, RStoolbox, rsvg, 
+  SCGLR, sdcMicro, seewave, SensMixed, sgd, simmr, sjPlot, snpEnrichment, 
+  sparkTable, spikeSlabGAM, spoccutils, strvalidator, tadaatoolbox, TcGSA, 
+  tigerstats, tigris, treemap, TriMatch, userfriendlyscience, varian, vmsbase
 
-* Maintainers were notified on Feb 10.
+I think the majority of these are because I'm not currently installing bioconductor packages. I hope to work on that in the future.