refactored testing/base into two files

Author: davidsebfischer

diffxpy/api/test.py

@@ -1,11 +1,2 @@
-from diffxpy.testing.base import two_sample
-from diffxpy.testing.base import lrt
-from diffxpy.testing.base import wald
-from diffxpy.testing.base import t_test
-from diffxpy.testing.base import rank_test
-from diffxpy.testing.base import partition
-from diffxpy.testing.base import pairwise
-from diffxpy.testing.base import versus_rest
-from diffxpy.testing.base import continuous_1d
-from diffxpy.testing.base import design_matrix
-from diffxpy.testing.base import coef_names
+from diffxpy.testing.tests import design_matrix, coef_names, lrt, wald, t_test, rank_test, two_sample, pairwise, \
+    versus_rest, partition, continuous_1d

diffxpy/enrichment/enrich.py

@@ -5,7 +5,7 @@
 
 from ..stats import stats
 from ..testing import correction
-from ..testing.base import _DifferentialExpressionTest
+from ..testing.det import _DifferentialExpressionTest
 
 logger = logging.getLogger(__name__)
 

diffxpy/pkg_constants.py

@@ -5,9 +5,9 @@
 BATCHGLM_OPTIM_ADAGRAD = False
 BATCHGLM_OPTIM_RMSPROP = False
 BATCHGLM_OPTIM_NEWTON = False
-BATCHGLM_OPTIM_NEWTON_TR = True
+BATCHGLM_OPTIM_NEWTON_TR = False
 BATCHGLM_OPTIM_IRLS = False
 BATCHGLM_OPTIM_IRLS_GD = False
 BATCHGLM_OPTIM_IRLS_TR = False
-BATCHGLM_OPTIM_IRLS_GD_TR = False
-BATCHGLM_PROVIDE_BATCHED = False
+BATCHGLM_OPTIM_IRLS_GD_TR = True
+BATCHGLM_PROVIDE_BATCHED = True