@@ -192,9 +192,7 @@ class DWIBiasCorrectInputSpec(MRTrix3BaseInputSpec):
192192 mandatory = True ,
193193 desc = "input DWI image" ,
194194 )
195- in_mask = File (
196- argstr = "-mask %s" , desc = "input mask image for bias field estimation"
197- )
195+ in_mask = File (argstr = "-mask %s" , desc = "input mask image for bias field estimation" )
198196 use_ants = traits .Bool (
199197 argstr = "ants" ,
200198 mandatory = True ,
@@ -411,9 +409,7 @@ def _list_outputs(self):
411409 outputs = self .output_spec ().get ()
412410 outputs ["out_file" ] = op .abspath (self .inputs .out_file )
413411 if self .inputs .export_grad_mrtrix :
414- outputs ["out_grad_mrtrix" ] = op .abspath (
415- self .inputs .out_grad_mrtrix
416- )
412+ outputs ["out_grad_mrtrix" ] = op .abspath (self .inputs .out_grad_mrtrix )
417413 if self .inputs .export_grad_fsl :
418414 outputs ["out_fsl_bvec" ] = op .abspath (self .inputs .out_grad_fsl [0 ])
419415 outputs ["out_fsl_bval" ] = op .abspath (self .inputs .out_grad_fsl [1 ])
@@ -447,15 +443,9 @@ class ResponseSDInputSpec(MRTrix3BaseInputSpec):
447443 usedefault = True ,
448444 desc = "output WM response text file" ,
449445 )
450- gm_file = File (
451- argstr = "%s" , position = - 2 , desc = "output GM response text file"
452- )
453- csf_file = File (
454- argstr = "%s" , position = - 1 , desc = "output CSF response text file"
455- )
456- in_mask = File (
457- exists = True , argstr = "-mask %s" , desc = "provide initial mask image"
458- )
446+ gm_file = File (argstr = "%s" , position = - 2 , desc = "output GM response text file" )
447+ csf_file = File (argstr = "%s" , position = - 1 , desc = "output CSF response text file" )
448+ in_mask = File (exists = True , argstr = "-mask %s" , desc = "provide initial mask image" )
459449 max_sh = InputMultiObject (
460450 traits .Int ,
461451 argstr = "-lmax %s" ,
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