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TEST: make specs
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4 files changed

+236
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‎nipype/interfaces/mrtrix3/tests/test_auto_Generate5tt.py‎

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@@ -37,7 +37,6 @@ def test_Generate5tt_inputs():
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),
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in_file=dict(
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argstr="%s",
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extensions=None,
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mandatory=True,
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position=-2,
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),

‎nipype/interfaces/mrtrix3/tests/test_auto_Generate5tt2gmwmi.py‎

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from ..utils import Generate5tt2gmwmi
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def test_Generate5tt2gmwmi_inputs():
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input_map = dict(
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args=dict(
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argstr="%s",
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),
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bval_scale=dict(
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argstr="-bvalue_scaling %s",
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),
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environ=dict(
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nohash=True,
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usedefault=True,
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),
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grad_file=dict(
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argstr="-grad %s",
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extensions=None,
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xor=["grad_fsl"],
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),
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grad_fsl=dict(
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argstr="-fslgrad %s %s",
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xor=["grad_file"],
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),
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in_bval=dict(
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extensions=None,
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),
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in_bvec=dict(
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argstr="-fslgrad %s %s",
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extensions=None,
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),
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in_file=dict(
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argstr="%s",
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extensions=None,
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mandatory=True,
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position=-2,
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),
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mask_in=dict(
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argstr="-mask_in %s",
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extensions=None,
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position=-3,
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),
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mask_out=dict(
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argstr="%s",
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extensions=None,
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mandatory=True,
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position=-1,
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),
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nthreads=dict(
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argstr="-nthreads %d",
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nohash=True,
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),
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out_bval=dict(
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extensions=None,
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),
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out_bvec=dict(
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argstr="-export_grad_fsl %s %s",
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extensions=None,
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),
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)
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inputs = Generate5tt2gmwmi.input_spec()
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for key, metadata in list(input_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(inputs.traits()[key], metakey) == value
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def test_Generate5tt2gmwmi_outputs():
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output_map = dict(
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mask_out=dict(
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extensions=None,
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),
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)
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outputs = Generate5tt2gmwmi.output_spec()
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for key, metadata in list(output_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(outputs.traits()[key], metakey) == value

‎nipype/interfaces/mrtrix3/tests/test_auto_MTNormalise.py‎

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from ..utils import MTNormalise
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def test_MTNormalise_inputs():
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input_map = dict(
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args=dict(
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argstr="%s",
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),
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bval_scale=dict(
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argstr="-bvalue_scaling %s",
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),
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csf_fod=dict(
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argstr="%s",
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extensions=None,
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position=5,
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),
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environ=dict(
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nohash=True,
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usedefault=True,
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),
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gm_fod=dict(
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argstr="%s",
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extensions=None,
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position=3,
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),
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grad_file=dict(
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argstr="-grad %s",
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extensions=None,
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xor=["grad_fsl"],
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),
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grad_fsl=dict(
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argstr="-fslgrad %s %s",
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xor=["grad_file"],
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),
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in_bval=dict(
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extensions=None,
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),
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in_bvec=dict(
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argstr="-fslgrad %s %s",
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extensions=None,
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),
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mask=dict(
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argstr="-mask %s",
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extensions=None,
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position=-1,
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),
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nthreads=dict(
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argstr="-nthreads %d",
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nohash=True,
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),
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out_bval=dict(
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extensions=None,
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),
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out_bvec=dict(
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argstr="-export_grad_fsl %s %s",
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extensions=None,
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),
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out_file_csf=dict(
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argstr="%s",
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extensions=None,
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position=6,
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),
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out_file_gm=dict(
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argstr="%s",
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extensions=None,
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position=4,
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),
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out_file_wm=dict(
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argstr="%s",
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extensions=None,
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position=2,
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),
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wm_fod=dict(
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argstr="%s",
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extensions=None,
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position=1,
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),
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)
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inputs = MTNormalise.input_spec()
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for key, metadata in list(input_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(inputs.traits()[key], metakey) == value
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def test_MTNormalise_outputs():
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output_map = dict(
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out_file_csf=dict(
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extensions=None,
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),
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out_file_gm=dict(
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extensions=None,
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),
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out_file_wm=dict(
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extensions=None,
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),
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)
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outputs = MTNormalise.output_spec()
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for key, metadata in list(output_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(outputs.traits()[key], metakey) == value

‎nipype/interfaces/mrtrix3/tests/test_auto_MaskFilter.py‎

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# AUTO-GENERATED by tools/checkspecs.py - DO NOT EDIT
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from ..utils import MaskFilter
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def test_MaskFilter_inputs():
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input_map = dict(
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args=dict(
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argstr="%s",
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),
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environ=dict(
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nohash=True,
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usedefault=True,
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),
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filter=dict(
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argstr="%s",
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mandatory=True,
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position=-2,
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),
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in_file=dict(
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argstr="%s",
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extensions=None,
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mandatory=True,
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position=-3,
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),
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npass=dict(
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argstr="-npass %d",
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position=1,
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),
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out_file=dict(
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argstr="%s",
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extensions=None,
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mandatory=True,
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name_source=["input_image"],
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position=-1,
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),
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)
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inputs = MaskFilter.input_spec()
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for key, metadata in list(input_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(inputs.traits()[key], metakey) == value
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def test_MaskFilter_outputs():
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output_map = dict(
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out_file=dict(
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extensions=None,
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),
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)
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outputs = MaskFilter.output_spec()
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for key, metadata in list(output_map.items()):
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for metakey, value in list(metadata.items()):
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assert getattr(outputs.traits()[key], metakey) == value

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