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nipype/interfaces/mrtrix3 Expand file tree Collapse file tree 3 files changed +8
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lines changed Original file line number Diff line number Diff line change @@ -101,18 +101,18 @@ class MRDeGibbsInputSpec(MRTrix3BaseInputSpec):
101101 'coronal = 0,2; sagittal = 1,2' )
102102 nshifts = traits .Int (
103103 default_value = 20 ,
104- use_default = True ,
104+ usedefault = True ,
105105 argstr = '-nshifts %d' ,
106106 desc = 'discretization of subpixel spacing (default = 20)' )
107107 minW = traits .Int (
108108 default_value = 1 ,
109- use_default = True ,
109+ usedefault = True ,
110110 argstr = '-minW %d' ,
111111 desc = 'left border of window used for total variation (TV) computation '
112112 '(default = 1)' )
113113 maxW = traits .Int (
114114 default_value = 3 ,
115- use_default = True ,
115+ usedefault = True ,
116116 argstr = '-maxW %d' ,
117117 desc = 'right border of window used for total variation (TV) computation '
118118 '(default = 3)' )
Original file line number Diff line number Diff line change @@ -59,6 +59,7 @@ def test_DWIBiasCorrect_inputs():
5959 ),
6060 use_fsl = dict (
6161 argstr = '-fsl' ,
62+ min_ver = '5.0.10' ,
6263 mandatory = True ,
6364 xor = ['use_ants' ],
6465 ),
Original file line number Diff line number Diff line change @@ -11,7 +11,7 @@ def test_MRDeGibbs_inputs():
1111 maxlen = 2 ,
1212 minlen = 2 ,
1313 sep = ',' ,
14- use_default = True ,
14+ usedefault = True ,
1515 ),
1616 bval_scale = dict (argstr = '-bvalue_scaling %s' , ),
1717 environ = dict (
@@ -40,15 +40,15 @@ def test_MRDeGibbs_inputs():
4040 ),
4141 maxW = dict (
4242 argstr = '-maxW %d' ,
43- use_default = True ,
43+ usedefault = True ,
4444 ),
4545 minW = dict (
4646 argstr = '-minW %d' ,
47- use_default = True ,
47+ usedefault = True ,
4848 ),
4949 nshifts = dict (
5050 argstr = '-nshifts %d' ,
51- use_default = True ,
51+ usedefault = True ,
5252 ),
5353 nthreads = dict (
5454 argstr = '-nthreads %d' ,
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