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lines changed Original file line number Diff line number Diff line change 1- # -*- coding: utf-8 -*-
2- # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-
3- # vi: set ft=python sts=4 ts=4 sw=4 et:
41"""
2+ Change directory to provide relative paths for doctests
3+ >>> import os
4+ >>> filepath = os.path.dirname( os.path.realpath( __file__ ) )
5+ >>> datadir = os.path.realpath(os.path.join(filepath, '../testing/data'))
6+ >>> os.chdir(datadir)
7+
58Nipype interface for PETPVC.
69
710PETPVC is a software from the Nuclear Medicine Department
@@ -217,19 +220,3 @@ def _gen_filename(self, name):
217220 if name == 'out_file' :
218221 return self ._list_outputs ()['out_file' ]
219222 return None
220-
221-
222- if __name__ == '__main__' :
223-
224- #from .testing import example_data
225- #TODO get data for PETPVC
226-
227- pvc = PETPVC ()
228- pvc .inputs .in_file = example_data ('pet.nii.gz' )
229- pvc .inputs .mask_file = example_data ('tissues.nii.gz' )
230- pvc .inputs .out_file = 'pet_pvc_rbv.nii.gz'
231- pvc .inputs .pvc = 'RBV'
232- pvc .inputs .fwhm_x = 2.0
233- pvc .inputs .fwhm_y = 2.0
234- pvc .inputs .fwhm_z = 2.0
235- pvc .run ()
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