|
19 | 19 | import re |
20 | 20 | from collections.abc import MutableSequence, MutableMapping, Iterable |
21 | 21 | from collections import OrderedDict |
| 22 | +from warnings import warn |
| 23 | + |
| 24 | +import numpy as np |
| 25 | + |
22 | 26 | from .. import xmlutils as xml |
23 | 27 | from ..filebasedimages import FileBasedHeader, SerializableImage |
24 | 28 | from ..dataobj_images import DataobjImage |
25 | 29 | from ..nifti1 import Nifti1Extensions |
26 | 30 | from ..nifti2 import Nifti2Image, Nifti2Header |
27 | 31 | from ..arrayproxy import reshape_dataobj |
28 | 32 | from ..caret import CaretMetaData |
29 | | -from warnings import warn |
| 33 | +from ..volumeutils import make_dt_codes |
30 | 34 |
|
31 | 35 |
|
32 | 36 | def _float_01(val): |
@@ -1383,7 +1387,8 @@ def __init__(self, |
1383 | 1387 | header=None, |
1384 | 1388 | nifti_header=None, |
1385 | 1389 | extra=None, |
1386 | | - file_map=None): |
| 1390 | + file_map=None, |
| 1391 | + dtype=None): |
1387 | 1392 | """ Initialize image |
1388 | 1393 |
|
1389 | 1394 | The image is a combination of (dataobj, header), with optional metadata |
@@ -1415,9 +1420,10 @@ def __init__(self, |
1415 | 1420 | self._nifti_header = LimitedNifti2Header.from_header(nifti_header) |
1416 | 1421 |
|
1417 | 1422 | # if NIfTI header not specified, get data type from input array |
1418 | | - if nifti_header is None: |
1419 | | - if hasattr(dataobj, 'dtype'): |
1420 | | - self._nifti_header.set_data_dtype(dataobj.dtype) |
| 1423 | + if dtype is not None: |
| 1424 | + self.set_data_dtype(dtype) |
| 1425 | + elif nifti_header is None and hasattr(dataobj, 'dtype'): |
| 1426 | + self.set_data_dtype(dataobj.dtype) |
1421 | 1427 | self.update_headers() |
1422 | 1428 |
|
1423 | 1429 | if self._dataobj.shape != self.header.matrix.get_data_shape(): |
|
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