Merge pull request #1356 from poldracklab/enh/no_keep_file_open

ENH: Do not set KEEP_FILE_OPEN_DEFAULT

Author: effigies

.circleci/config.yml

@@ -601,8 +601,10 @@ jobs:
           at: /tmp
       - restore_cache:
           keys:
-            - ds210-anat-v4-{{ epoch }}
-            - ds210-anat-v4-
+            - ds210-anat-v5-{{ .Branch }}-{{ epoch }}
+            - ds210-anat-v5-{{ .Branch }}
+            - ds210-anat-v5-master
+            - ds210-anat-v5-
       - run:
           name: Setting up test
           command: |
@@ -636,7 +638,7 @@ jobs:
                 --fs-no-reconall --sloppy --write-graph \
                 --mem_mb 4096 --nthreads 2 --anat-only -vv
       - save_cache:
-         key: ds210-anat-v4-{{ epoch }}
+         key: ds210-anat-v5-{{ .Branch }}-{{ epoch }}
          paths:
             - /tmp/ds210/work
             - /tmp/ds210/derivatives

fmriprep/cli/run.py

@@ -18,9 +18,6 @@
 from argparse import RawTextHelpFormatter
 from multiprocessing import cpu_count
 from time import strftime
-import nibabel
-
-nibabel.arrayproxy.KEEP_FILE_OPEN_DEFAULT = 'auto'
 
 logging.addLevelName(25, 'IMPORTANT')  # Add a new level between INFO and WARNING
 logging.addLevelName(15, 'VERBOSE')  # Add a new level between INFO and DEBUG