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‎.github/workflows/codeql.yml‎

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# For most projects, this workflow file will not need changing; you simply need
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# to commit it to your repository.
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#
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# You may wish to alter this file to override the set of languages analyzed,
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# or to provide custom queries or build logic.
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#
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# ******** NOTE ********
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# We have attempted to detect the languages in your repository. Please check
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# the `language` matrix defined below to confirm you have the correct set of
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# supported CodeQL languages.
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#
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name: "CodeQL"
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on:
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pull_request:
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# The branches below must be a subset of the branches above
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branches: [ "master", "dev", "release/*" ]
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jobs:
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code_ql:
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name: CodeQL Analysis
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runs-on: ubuntu-latest
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permissions:
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actions: read
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contents: read
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security-events: write
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strategy:
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fail-fast: false
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matrix:
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language: [ 'python' ]
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# CodeQL supports [ 'cpp', 'csharp', 'go', 'java', 'javascript', 'python', 'ruby' ]
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# Use only 'java' to analyze code written in Java, Kotlin or both
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# Use only 'javascript' to analyze code written in JavaScript, TypeScript or both
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# Learn more about CodeQL language support at https://aka.ms/codeql-docs/language-support
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steps:
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- name: Checkout repository
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uses: actions/checkout@v3
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# Initializes the CodeQL tools for scanning.
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- name: Initialize CodeQL
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uses: github/codeql-action/init@v2
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with:
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languages: ${{ matrix.language }}
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# If you wish to specify custom queries, you can do so here or in a config file.
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# By default, queries listed here will override any specified in a config file.
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# Prefix the list here with "+" to use these queries and those in the config file.
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# Details on CodeQL's query packs refer to : https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs
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# queries: security-extended,security-and-quality
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# Autobuild attempts to build any compiled languages (C/C++, C#, Go, or Java).
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# If this step fails, then you should remove it and run the build manually (see below)
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# - name: Autobuild
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# uses: github/codeql-action/autobuild@v2
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# ℹ️ Command-line programs to run using the OS shell.
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# 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
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# If the Autobuild fails above, remove it and uncomment the following three lines.
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# modify them (or add more) to build your code if your project, please refer to the EXAMPLE below for guidance.
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# - run: |
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# echo "Run, Build Application using script"
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# ./location_of_script_within_repo/buildscript.sh
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- name: Perform CodeQL Analysis
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uses: github/codeql-action/analyze@v2
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with:
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category: "/language:${{matrix.language}}"

‎.github/workflows/coverage.yml‎

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name: Coverage
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on:
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push:
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pull_request:
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paths:
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- prog_models
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jobs:
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coverage:
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timeout-minutes: 30
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runs-on: ubuntu-latest
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strategy:
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matrix:
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python-version: ['3.10']
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steps:
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- uses: actions/checkout@v3
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v4
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install dependencies cache
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uses: actions/cache@v2
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with:
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path: ~/.cache/pip
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key: pip-cache
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- name: Install additional dependencies
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run: |
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pip install coverage
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pip install importlib_metadata
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- name: Update
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run: pip install --upgrade --upgrade-strategy eager -e .
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- name: Run coverage
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run: |
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coverage run -m tests.test_base_models
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coverage run -a -m tests.test_battery
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coverage run -a -m tests.test_calc_error
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coverage run -a -m tests.test_centrifugal_pump
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coverage run -a -m tests.test_composite
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coverage run -a -m tests.test_datasets
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coverage run -a -m tests.test_dict_like_matrix_wrapper
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coverage run -a -m tests.test_direct
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coverage run -a -m tests.test_estimate_params
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coverage run -a -m tests.test_ensemble
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coverage run -a -m tests.test_linear_model
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coverage run -a -m tests.test_pneumatic_valve
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coverage run -a -m tests.test_powertrain
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coverage run -a -m tests.test_serialization
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coverage run -a -m tests.test_sim_result
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coverage run -a -m tests.test_uav_model
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coverage xml -i
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- name: "Upload coverage to Codecov"
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uses: codecov/codecov-action@v3

‎.github/workflows/greetings.yml‎

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name: Greetings
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on: [pull_request_target]
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jobs:
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greeting:
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runs-on: ubuntu-latest
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permissions:
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issues: write
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pull-requests: write
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steps:
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- uses: actions/first-interaction@v1
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with:
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repo-token: ${{ secrets.GITHUB_TOKEN }}
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pr-message: "Thank you for your contributions. If you haven't already, please send a signed Contributor License Agreement (CLA) to Christopher Teubert (christopher.a.teubert@nasa.gov). CLAs can be found here: https://github.com/nasa/prog_models/tree/master/forms. Also, make sure you're familiar with the developer notes and contributing sections of our developers guide, https://nasa.github.io/progpy/dev_guide.html#notes-for-developers"

‎.github/workflows/pr-messages.yml‎

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name: Print PR Message - Non Release
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on:
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pull_request:
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branches:
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- 'dev'
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types: [opened]
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jobs:
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pr_msg:
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timeout-minutes: 5
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runs-on: ubuntu-latest
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steps:
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- name: Auto Comment
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uses: wow-actions/auto-comment@v1
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with:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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pullRequestOpened: >
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Thank you for opening this PR. Each PR into dev requires a code review. For the code review, look at the following:
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- [ ] Reviewer (someone other than author) should look for bugs, efficiency, readability, testing, and coverage in examples (if relevant).
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- [ ] Ensure that each PR adding a new feature should include a test verifying that feature.
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- [ ] All errors from static analysis must be resolved.
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- [ ] Review the test coverage reports (if there is a change) - will be added as comment on PR if there is a change
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- [ ] Review the software benchmarking results (if there is a change) - will be added as comment on PR
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- [ ] Any added dependencies are included in requirements.txt, setup.py, and dev_guide.rst (this document)
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- [ ] All warnings from static analysis must be reviewed and resolved - if deemed appropriate.

‎.github/workflows/print-benchmarking.yml‎

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name: Print Benchmarking
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on: pull_request
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jobs:
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benchmark_branch:
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timeout-minutes: 20
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runs-on: ubuntu-latest
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strategy:
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matrix:
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python-version: ['3.9']
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steps:
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- uses: actions/checkout@v2
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v2
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install dependencies
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run: |
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python -m pip install --upgrade pip
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python -m pip install -e .
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- name: benchmark
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id: bench
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shell: bash
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run: |
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bench=$(python -m tests.benchmarking)
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# V To support multiline strings V
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bench="${bench//'%'/'%25'}"
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bench="${bench//$'\n'/'%0A'}"
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bench="${bench//$'\r'/'%0D'}"
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echo "::set-output name=bench::$bench"
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- name: Clone prog_models
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uses: actions/checkout@v2
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with:
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repository: nasa/prog_models
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ref: ${{ github.event.pull_request.base.ref }}
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path: prog_models_target
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- name: Downgrade
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run: |
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python -m pip uninstall -y prog_models
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python -m pip install -e ./prog_models_target
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cd prog_models_target
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- name: benchmark-pre
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id: bench-pre
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shell: bash
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run: |
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bench=$(python -m tests.benchmarking)
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# V To support multiline strings V
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bench="${bench//'%'/'%25'}"
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bench="${bench//$'\n'/'%0A'}"
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bench="${bench//$'\r'/'%0D'}"
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echo "::set-output name=bench::$bench"
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- name: Auto Comment
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uses: wow-actions/auto-comment@v1
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with:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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pullRequestOpened: >
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Benchmarking Results
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From:
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${{steps.bench-pre.outputs.bench}}
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To:
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${{steps.bench.outputs.bench}}
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pullRequestSynchronize: >
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Benchmarking Results [Update]
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From:
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${{steps.bench-pre.outputs.bench}}
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To:
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${{steps.bench.outputs.bench}}

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