up

Author: Thechopsee

src/main/java/cz/it4i/fiji/legacy/CloneEmptyDatasetFromN5toZarr.java

@@ -27,7 +27,7 @@
 import java.util.concurrent.ExecutionException;
 import java.util.concurrent.Future;
 
-@Plugin(type = Command.class, headless = true, menuPath = "Plugins>HPC DataStore>Create ZARR>Create new dataset from existing N5")
+@Plugin(type = Command.class, headless = true, menuPath = "Plugins>HPC DataStore>ZARR Convert>Create new dataset from existing N5")
 
 public class CloneEmptyDatasetFromN5toZarr implements Command {
     @Parameter(label = "URL of a reference DatasetsRegisterService:", persistKey = "datasetserverurl")

src/main/java/cz/it4i/fiji/legacy/CloneEmptyDatasetFromZarrtoN5.java

@@ -3,10 +3,11 @@
 import org.scijava.command.Command;
 import org.scijava.plugin.Plugin;
 
-@Plugin(type = Command.class, headless = true, menuPath = "Plugins>HPC DataStore>Create>Create empty dataset from Zarr")
+/*@Plugin(type = Command.class, headless = true, menuPath = "Plugins>HPC DataStore>Create>Create empty dataset from Zarr")
 public class CloneEmptyDatasetFromZarrtoN5 implements Command{
     @Override
     public void run() {
 
     }
 }
+*/

src/main/java/cz/it4i/fiji/legacy/CreateNewDatasetFromJSON.java

@@ -38,8 +38,6 @@ public class CreateNewDatasetFromJSON implements Command {
 	@Parameter(type = ItemIO.OUTPUT, label="Label of the created dataset:")
 	public String newDatasetLabel;
 
-	@Parameter
-	public String datasetType;
 
 	@Override
 	public void run() {
@@ -48,10 +46,6 @@ public void run() {
 
 		try {
 			String add="/datasets";
-			/*if(datasetType.equals("Zarr"))
-			{
-				add+="zarr";
-			}*/
 			final HttpURLConnection connection = (HttpURLConnection)new URL("http://"+this.url+add).openConnection();
 			connection.setRequestMethod("POST");
 			connection.setRequestProperty("Content-Type","application/json");

src/main/java/cz/it4i/fiji/legacy/common/ImagePlusTransferrer.java

@@ -337,8 +337,6 @@ void writeWithAType(final RandomAccessibleInterval<T> rai, final T ofThisType) {
 							myLogger.info("=========================");
 							myLogger.info("Uploading "+t);
 							connection = (HttpURLConnection) new URL(t.URL).openConnection();
-							//todo clean
-							System.out.println("URL for test"+URL);
 							connection.setRequestMethod("POST");
 							connection.setRequestProperty("Content-Type","application/octet-stream"); //to prevent from 415 err code (Unsupported Media Type)
 							connection.setDoOutput(true);