|
11 | 11 | "import matplotlib.pyplot as plt\n", |
12 | 12 | "import pymc3 as pm\n", |
13 | 13 | "import seaborn as sns\n", |
| 14 | + "import arviz as az\n", |
14 | 15 | "from utils import ECDF\n", |
15 | 16 | "from data import load_kruschke\n", |
16 | 17 | "\n", |
|
290 | 291 | "outputs": [], |
291 | 292 | "source": [ |
292 | 293 | "# Use `pm.plot_posterior()`\n", |
293 | | - "pm.plot_posterior(trace, varnames=['mu_drug', 'mu_placebo'])" |
| 294 | + "az.plot_posterior(trace, var_names=['mu_drug', 'mu_placebo'])" |
294 | 295 | ] |
295 | 296 | }, |
296 | 297 | { |
|
377 | 378 | "metadata": {}, |
378 | 379 | "outputs": [], |
379 | 380 | "source": [ |
380 | | - "pm.plot_posterior(trace=trace, varnames=['diff_means', 'effect_size'])" |
| 381 | + "az.plot_posterior(trace=trace, var_names=['diff_means', 'effect_size'])" |
381 | 382 | ] |
382 | 383 | }, |
383 | 384 | { |
|
488 | 489 | "metadata": {}, |
489 | 490 | "outputs": [], |
490 | 491 | "source": [ |
491 | | - "traces = pm.traceplot(trace_alt)" |
| 492 | + "traces = az.traceplot(trace_alt)" |
492 | 493 | ] |
493 | 494 | }, |
494 | 495 | { |
|
497 | 498 | "metadata": {}, |
498 | 499 | "outputs": [], |
499 | 500 | "source": [ |
500 | | - "pm.plot_posterior(trace_alt, varnames=['mu', 'effect_size'])" |
| 501 | + "az.plot_posterior(trace_alt, var_names=['mu', 'effect_size'])" |
501 | 502 | ] |
502 | 503 | }, |
503 | 504 | { |
|
521 | 522 | ], |
522 | 523 | "metadata": { |
523 | 524 | "kernelspec": { |
524 | | - "display_name": "bayesian-modelling-tutorial", |
| 525 | + "display_name": "Python 3", |
525 | 526 | "language": "python", |
526 | | - "name": "bayesian-modelling-tutorial" |
| 527 | + "name": "python3" |
527 | 528 | }, |
528 | 529 | "language_info": { |
529 | 530 | "codemirror_mode": { |
|
535 | 536 | "name": "python", |
536 | 537 | "nbconvert_exporter": "python", |
537 | 538 | "pygments_lexer": "ipython3", |
538 | | - "version": "3.6.6" |
| 539 | + "version": "3.6.8" |
539 | 540 | }, |
540 | 541 | "toc": { |
541 | 542 | "base_numbering": 1, |
|
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