@@ -73,7 +73,7 @@ mkdir -p data/cwl_wes/db data/cwl_wes/output data/cwl_wes/tmp
7373Clone repository:
7474
7575``` bash
76- git clone https://github.com/elixir-cloud-aai/cwl-WES.git app
76+ git clone https://github.com/elixir-cloud-aai/cwl-WES.git
7777```
7878
7979Traverse to app directory:
139139Copy the file into the running worker container(s):
140140
141141``` bash
142- for cont in $( docker ps --all | grep cwl-wes_wes -worker | cut -f1 -d" " ) ; do
142+ for cont in $( docker ps --all | grep wes -worker | cut -f1 -d" " ) ; do
143143 docker cp .netrc " ${cont} :/tmp/user"
144144done
145145```
149149Visit Swagger UI:
150150
151151``` bash
152- firefox http://localhost:7777 /ga4gh/wes/v1/ui
152+ firefox http://localhost:8080 /ga4gh/wes/v1/ui
153153```
154154
155155Example values to start a simple CWL test workflow via the ` POST /runs `
@@ -170,8 +170,8 @@ the `GET /runs` endpoint:
170170``` console
171171curl -X GET \
172172 --header 'Accept: application/json' \
173- 'http://localhost:7777 /ga4gh/wes/v1/runs'
174- ```
173+ 'http://localhost:8080 /ga4gh/wes/v1/runs'
174+ ```
175175
176176###### Authorization
177177
@@ -187,7 +187,7 @@ security:
187187` ` `
188188
189189To send authorized requests, you **must** be in possession of a valid JWT
190- Bearer token. The app was developed against JWTs issues by
190+ Bearer token. The app was developed against JWTs issues by
191191[ELIXIR AAI][elixir-aai], although JWTs issued by other identity providers may
192192work.
193193
@@ -207,13 +207,13 @@ so:
207207curl -X GET \
208208 --header 'Accept: application/json' \
209209 --header 'Authorization: Bearer <YOUR_TOKEN>' \
210- 'http://localhost:7777 /ga4gh/wes/v1/runs'
211- ` ` `
210+ 'http://localhost:8080 /ga4gh/wes/v1/runs'
211+ ` ` `
212212
213213If you are making use of the Swagger UI, you will need to click on the
214214**Authorize** button (which appears on the right-hand side of the top bar upon
215215enabling the `authorization_required` option) of the Swagger UI website and
216- enter your JWT token in the `api_key` field, preceded by the `Bearer` prefix :
216+ enter your JWT token in the `api_key` field, preceded by the `Bearer` prefix :
217217
218218
219219
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