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some doc updates
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lib/jpt1.jar

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replication/org/cicirello/replication/arxiv2019may/CompareKendallTauSequenceDistAlgsDoubles.java

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/**
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* <p>This program replicates the data for the paper:<br>
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html">"Kendall Tau
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html" target=_top>"Kendall Tau
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* Sequence Distance: Extending Kendall Tau from Ranks to Sequences,"</a>
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* arXiv preprint arXiv:1905.02752 [cs.DM], May 2019.</p>
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*

replication/org/cicirello/replication/arxiv2019may/CompareKendallTauSequenceDistAlgsInts.java

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/**
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* <p>This program replicates the data for the paper:<br>
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html">"Kendall Tau
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html" target=_top>"Kendall Tau
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* Sequence Distance: Extending Kendall Tau from Ranks to Sequences,"</a>
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* arXiv preprint arXiv:1905.02752 [cs.DM], May 2019.</p>
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*

replication/org/cicirello/replication/arxiv2019may/CompareKendallTauSequenceDistAlgsString.java

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/**
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* <p>This program replicates the data for the paper:<br>
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html">"Kendall Tau
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html" target=_top>"Kendall Tau
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* Sequence Distance: Extending Kendall Tau from Ranks to Sequences,"</a>
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* arXiv preprint arXiv:1905.02752 [cs.DM], May 2019.</p>
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*

replication/org/cicirello/replication/arxiv2019may/CompareKendallTauSequenceDistAlgsStringArray.java

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/**
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* <p>This program replicates the data for the paper:<br>
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html">"Kendall Tau
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html" target=_top>"Kendall Tau
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* Sequence Distance: Extending Kendall Tau from Ranks to Sequences,"</a>
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* arXiv preprint arXiv:1905.02752 [cs.DM], May 2019.</p>
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*

src/org/cicirello/sequences/distance/KendallTauSequenceDistance.java

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* assumes permutations of the integers from 0 to N-1.</p>
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*
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* <p>This distance metric, and both algorithms, is first described in the paper:<br>
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html">"Kendall Tau
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* V.A. Cicirello, <a href="https://www.cicirello.org/publications/cicirello2019arXiv.html" target=_top>"Kendall Tau
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* Sequence Distance: Extending Kendall Tau from Ranks to Sequences,"</a>
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* arXiv preprint arXiv:1905.02752 [cs.DM], May 2019.</p>
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*

src/overview.html

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<html>
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<body>
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<p>The JavaPermutationTools (JPT) API provides Java classes that enable representing
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and generating permutations, as well as performing computation on permutations. This
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initial release primarily consists of implementations of a variety of permutation
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distance metrics. More computation on permutations will be added in later releases.</p>
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<p>The JavaPermutationTools (JPT) API provides Java classes for computation on
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permutations and sequences. The current release enables representing
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and generating permutations, implementations of a variety of permutation
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distance metrics, as well as sequence distance metrics. The sequence distance
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metrics support computing the distance between pairs of Strings, arrays of primitive values,
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as well as arrays of objects. More computation on permutations
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will be added in later releases.</p>
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<p>The <a href="https://github.com/cicirello/JavaPermutationTools" target=_top>source code repository</a>
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is hosted on GitHub, and includes the source code, example programs, as well as programs
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that reproduce results from published research papers that have either used this API or

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