From 9894c942c9d5c08f68bf89b8cf4ff55ed393f921 Mon Sep 17 00:00:00 2001 From: Dan Bolser Date: Mon, 29 Sep 2025 12:58:19 +0100 Subject: [PATCH 1/3] Update 1000-genomes.yaml Is it me? Am I insane? --- datasets/1000-genomes.yaml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/datasets/1000-genomes.yaml b/datasets/1000-genomes.yaml index 047a20b87..1cbb83712 100644 --- a/datasets/1000-genomes.yaml +++ b/datasets/1000-genomes.yaml @@ -19,6 +19,8 @@ Resources: Type: S3 Bucket DataAtWork: Tutorials: + - Title: Download VCFs + Description: To do the most basic thing you can imagine, do this, for example: `aws s3 cp --no-sign-request s3://1000genomes/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chrY.recalibrated_variants.vcf.gz`. Change chrY to whatever you want, and add .tbi if you like. Tools & Applications: - Title: Examine genomic variation across populations with AWS URL: https://aws.amazon.com/blogs/industries/examine-genomic-variation-across-populations-with-aws/ From 863c1461860715e8b03f86ba546266371462776d Mon Sep 17 00:00:00 2001 From: Beryl Rabindran Date: Fri, 24 Oct 2025 15:34:23 -0400 Subject: [PATCH 2/3] ok: Update 1000-genomes.yaml --- datasets/1000-genomes.yaml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/datasets/1000-genomes.yaml b/datasets/1000-genomes.yaml index 1cbb83712..c8b1a1910 100644 --- a/datasets/1000-genomes.yaml +++ b/datasets/1000-genomes.yaml @@ -19,8 +19,8 @@ Resources: Type: S3 Bucket DataAtWork: Tutorials: - - Title: Download VCFs - Description: To do the most basic thing you can imagine, do this, for example: `aws s3 cp --no-sign-request s3://1000genomes/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chrY.recalibrated_variants.vcf.gz`. Change chrY to whatever you want, and add .tbi if you like. + - Title: How to download VCFs + Description: To download a VCF to your current directory, do this, for example: "aws s3 cp --no-sign-request s3://1000genomes/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chrY.recalibrated_variants.vcf.gz . ". Change chrY to whatever you want, and add .tbi if you'd like. Tools & Applications: - Title: Examine genomic variation across populations with AWS URL: https://aws.amazon.com/blogs/industries/examine-genomic-variation-across-populations-with-aws/ From ab59be62f305961a8134ca23cc5ce4a9797f397c Mon Sep 17 00:00:00 2001 From: Beryl Rabindran Date: Fri, 24 Oct 2025 15:39:15 -0400 Subject: [PATCH 3/3] ok: Update 1000-genomes.yaml --- datasets/1000-genomes.yaml | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/datasets/1000-genomes.yaml b/datasets/1000-genomes.yaml index c8b1a1910..207303c5a 100644 --- a/datasets/1000-genomes.yaml +++ b/datasets/1000-genomes.yaml @@ -20,8 +20,10 @@ Resources: DataAtWork: Tutorials: - Title: How to download VCFs - Description: To download a VCF to your current directory, do this, for example: "aws s3 cp --no-sign-request s3://1000genomes/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chrY.recalibrated_variants.vcf.gz . ". Change chrY to whatever you want, and add .tbi if you'd like. - Tools & Applications: + Description: | + To download a VCF to your current directory, do this - + "aws s3 cp --no-sign-request s3://1000genomes/1000G_2504_high_coverage/working/20201028_3202_raw_GT_with_annot/20201028_CCDG_14151_B01_GRM_WGS_2020-08-05_chrY.recalibrated_variants.vcf.gz ." + Change chrY to whatever you want, and add .tbi if needed. - Title: Examine genomic variation across populations with AWS URL: https://aws.amazon.com/blogs/industries/examine-genomic-variation-across-populations-with-aws/ AuthorName: Konstantinos Tzouvanas