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cimendescimendes
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fix bug in denim recipe
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flowcraft/generator/recipes/denim.py

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -33,12 +33,12 @@ def __init__(self):
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},
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"bowtie":{
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"directives": {"container": "flowcraft/bowtie_dengue", "version": "2-1"},
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"pararm": {"reference": "'/ref/1_GenotypesDENV_14-05-18.fasta'"}
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"params": {"reference": "'/ref/1_GenotypesDENV_14-05-18.fasta'"}
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},
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"assembly_mapping": {
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"param": {"AMaxContigs": "1000", "genomeSize": "0.01"}
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"params": {"AMaxContigs": "1000", "genomeSize": "0.01"}
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},
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"split_assembly": {
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"param": {"size": "10000"}
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"params": {"size": "10000"}
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}
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}

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