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1 parent 4cff444 commit daaa7feCopy full SHA for daaa7fe
src/NetMSA.jl
@@ -181,15 +181,15 @@ end
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Return the weight of the row, calculated as:
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-``math
+```math
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w(r) = \begin{equation*}
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\begin{cases}
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w_1 \times \frac{x}{c}; & \text{ if r is not aligned} \\
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w_2 \times \frac{n_s}{c}; & \text{ if r is aligned} \\
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w_3; & \text{ if r is full} \\
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\end{cases}
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\end{equation*}
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-``
+```
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where n_s is the number of occurrences of the symbol s in the aligned row r,
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and c is the total number of columns in the row. The value of x is equal to zero
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if every symbol in the row r occurred at most once, otherwise x is equal to the
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