@@ -2073,7 +2073,7 @@ \subsection{Variables}
20732073\begin {frame }[fragile]{Examples of redirects and pipes when working with molecular data II}
20742074 \begin {bashcode }
20752075 # How many FASTQ reads are there in the file
2076- cat file.fastq | echo "$((" $ (wc -l)" / 4 ))"
2076+ echo "$((" $ (wc -l file.fastq )" / 4 ))"
20772077 # Count number of *.FNA or *.fasta files in current directory
20782078 find . -maxdepth 1 -name "*.FNA" -o -name "*.fasta" | wc -l
20792079 # Same as above, saving output to the file
@@ -2250,10 +2250,10 @@ \subsection{Network}
22502250 # (22 for SSH, can be any)
22512251 nc -vz web.natur.cuni.cz 22
22522252 man nc # See for more information; "nc" is alias for "netcat"
2253- netstat -atn # Information about all network connections
2254- netstat -ntplu # Show open TCP/UDP ports
2255- netstat -anp # Show active connections
2256- ss --help # netstat is deprecated, prefer usage of ss
2253+ ss -atn # Information about all network connections
2254+ ss -ntplu # Show open TCP/UDP ports
2255+ ss -anp # Show active connections
2256+ ss --help # More options...
22572257 # If using nmap at faculty, firewall disconnects you for 10 minutes!
22582258 nmap -r someserver.cz # Scan someserver.cz for opened ports
22592259 nmap botany.natur.cuni.cz --script ssh-hostkey # See SSH key
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