Merge pull request #155 from zengyuy/master

donglaiw · web-flow · commit b21b0076a6c5 · 2025-02-03T16:04:49.000-05:00
Minor bug fixes
diff --git a/configs/SNEMI/SNEMI-Affinity-UNet-LR.yaml b/configs/SNEMI/SNEMI-Affinity-UNet-LR.yaml
@@ -1,4 +1,4 @@
-# output long-rannge affinity map
+# output long-range affinity map
 MODEL:
   ARCHITECTURE: unet_3d
   BLOCK_TYPE: residual_se
diff --git a/connectomics/utils/evaluate.py b/connectomics/utils/evaluate.py
@@ -241,7 +241,7 @@ def contingency_table(seg, gt, ignore_seg=[0], ignore_gt=[0], norm=True):
     """
     segr = seg.ravel()
     gtr = gt.ravel()
-    ignored = np.zeros(segr.shape, np.bool)
+    ignored = np.zeros(segr.shape, bool)
     data = np.ones(len(gtr))
     for i in ignore_seg:
         ignored[segr == i] = True

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-# output long-rannge affinity map`
	`1`	`+# output long-range affinity map`
`2`	`2`	`MODEL:`
`3`	`3`	`ARCHITECTURE: unet_3d`
`4`	`4`	`BLOCK_TYPE: residual_se`