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Merge pull request #4 from BiAPoL/main
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.DS_Store

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README.md

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* [Processing folders](http://nbviewer.jupyter.org/github/BiAPoL/Bio-image_Analysis_with_Python/blob/main/image_processing/12_process_folders.ipynb)
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* [Homework: automatic cell count](https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/main/gpu_acceleration/homework_automatic_cellcount.pdf)
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* Block 7 - Introduction to Biostatistics
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* [Introduction to Biostatistics](https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/main/biostatistics/Stats1_without_pictures.pdf)
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* [Confidence intervals of a proportion](https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/main/biostatistics/stats1.ipynb)
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* Block 8 - Descriptive statistics
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* [Lecture for descriptive statistics](https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/main/biostatistics/Stats2.pdf)
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* [Descriptive statistics and distributions](https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/main/biostatistics/stats2.ipynb)
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* Block 9 - Method Comparison - Bland-Altman analysis
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* Block 10 - Hypothesis testing
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* Block 11 - Big data and data visualization

biostatistics/.DS_Store

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biostatistics/Stats2.pdf

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biostatistics/Untitled.ipynb

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{
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"cells": [
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{
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"cell_type": "markdown",
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"id": "4a26232c",
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"metadata": {},
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"source": [
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"# Descriptive statistics"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 1,
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"id": "21cf78a6",
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"metadata": {},
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"outputs": [],
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"source": [
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"import numpy as np\n",
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"import seaborn as sns\n",
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"import scipy.stats as st\n",
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"import matplotlib.pyplot as plt\n",
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"import matplotlib.mlab as mlab\n",
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"import pandas as pd\n",
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"import statsmodels.api as sm\n",
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"import statistics\n",
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"import os \n",
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"from scipy.stats import norm"
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]
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},
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{
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"cell_type": "markdown",
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"id": "ffb951eb",
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"metadata": {},
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"source": [
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"## Probability data, binomial distribution"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "543de0c2",
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"metadata": {},
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"outputs": [],
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"source": []
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}
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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python 3",
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"language": "python",
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.9.5"
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}
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},
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"nbformat": 4,
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"nbformat_minor": 5
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}

biostatistics/data/.DS_Store

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biostatistics/data/BBBC001.csv

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biostatistics/stats1.ipynb

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biostatistics/stats2.ipynb

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